Job Description P17446 Confidence 99.86% Date Thu Jan 5 11:36:13 GMT 2012 Rank 21 Aligned Residues 179 % Identity 17% Template c1vi0B_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator Resolution 1.65 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R	L	Q
Query Conservation
Alig confidence																																																																										.	.
Template Conservation																																																																										.	.
Template Sequence		K	Y	X	Q	I	I	D	A	A	V	E	V	I	A	E	N	G	Y	H	Q	S	Q	V	S	K	I	A	K	Q	A	G	V	A	D	G	T	I	Y	L	Y	F	K	N	K	E	D	I	L	I	S	L	F	K	E	K	X	G	Q	F	I	E	R	X	E	E	D	I	K	E	K	A	T	.	.	A	K	E	K	L	A
Template Known Secondary structure																			T	T	T											T											S	S																								G	G	G			S	.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	.	.	.	.	.	.	R	R	E	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																								.	.																													.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		L	V	I	S	K	H	F	S	L	L	A	G	D	H	N	L	A	I	V	T	Q	L	.	.	E	L	R	Q	S	N	L	E	L	R	Q	K	I	N	E	I	L	K	G	Y	L	N	I	L	D	G	I	L	T	E	G	I	Q	S	G	E	I	K	E	G	L	D	V	R	L	A	R	Q	X	I	F	G	T	I	D	E
Template Known Secondary structure													T											.	.	T	S	S		S	S																													T	S	S		T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	T	T	W	V	X	N	D	Q	K	Y	D	L	V	A	L	S	N	S	V	L	E	L	L	V	S	G	I
Template Known Secondary structure									T	T	T		S		T	G	G	G												S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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