Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF67
Confidence85.95%DateThu Jan 5 11:31:26 GMT 2012
Rank124Aligned Residues42
% Identity24%Templatec3mvpA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:tetr/acrr transcriptional regulator; PDBTitle: the crystal structure of a tetr/acrr transcriptional regulator from2 streptococcus mutans to 1.85a
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20......... 30.........40.........
Predicted Secondary structure 









.........




Query SS confidence 





















. . . . . . . . .



















Query Sequence  SKKPRKQHSPEFRSEALKLAER. . . . . . . . . IGVTAAARELSLYESQLYNW
Query Conservation    
 

 

 


  

 
   .........  
  

  


   

  
Alig confidence 





















.........



















Template Conservation   
 
   
   

  

 

  
    
    

  

  



  


 
Template Sequence  IRKPKQERSIEKRNKILQVAKDLFSDKTYFNVTTNEIAKKADVSVGTLYAY
Template Known Secondary structure  SS

SS

GGG

TS
Template Predicted Secondary structure 
















Template SS confidence 


















































   16...20.........30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions