Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence88.04%DateThu Jan 5 12:12:26 GMT 2012
Rank406Aligned Residues40
% Identity13%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   621........630.........640.........650.........660..
Predicted Secondary structure 








Query SS confidence 









































Query Sequence  EEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRL
Query Conservation    

  
  

    
   
   

  




 

 



  
Alig confidence 
















..






















Template Conservation       


  
      ..   


  
 

 



  
  
Template Sequence  DTDVAVLLKXVEIEKPI. . TSEELADIFKLSKTTVENSLKKL
Template Known Secondary structure 
S
..T

Template Predicted Secondary structure 




..



Template SS confidence 









































   21........30....... ..40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions