Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence93.36%DateThu Jan 5 12:12:26 GMT 2012
Rank240Aligned Residues41
% Identity24%Templated2cyya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620.........630.........640.........650.........660..
Predicted Secondary structure 








Query SS confidence 











































Query Sequence  NDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRL
Query Conservation      

  
  

    
   
   

  




 

 



  
Alig confidence 










..






.






















Template Conservation 

  
  

  ..
    
 .
  


  



  

  

  
Template Sequence  LDEIDKKIIKI. . LQNDGKA. PLREISKITGLAESTIHERIRKL
Template Known Secondary structure 

..
TT
.

S
Template Predicted Secondary structure 

..



.



Template SS confidence 











































   5....10..... ....20.. .......30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions