Job Description P71229 Confidence 84.93% Date Thu Jan 5 12:12:26 GMT 2012 Rank 489 Aligned Residues 148 % Identity 14% Template d1tf1a_ SCOP info Profilin-like GAF domain-like IclR ligand-binding domain-like Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		L	S	H	L	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L	T	Q	T	L	Q	T	R	Q	P	T	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																								.																																																					.	.	.	.	.
Template Conservation																								.
Template Sequence		Q	G	H	M	D	V	L	S	V	A	G	P	F	M	R	R	L	M	L	L	S	G	.	E	T	V	N	V	A	I	R	N	G	N	E	A	V	L	I	G	Q	L	E	C	K	S	M	V	R	M	C	A	P	L	G	S	R	L	P	L	H	A	S	G	A	G	K	A	L	L	Y	P	L	A	E	E	E	L	M	S
Template Known Secondary structure																								.	S									T	T											S		S	S	S					T	T					T	T	T	S								T	T	S
Template Predicted Secondary structure																								.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
										240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.									.
Query SS confidence		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.									.
Query Sequence		.	.	.	.	.	.	.	.	L	T	H	R	A	D	D	L	F	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	.	.	.	.	.	.	.	.	.	.	S	A	L	L	I	P	L	T	.	F	G	N	H	T	P	G	A	L	L	L	A	H	T	S	S	T	L	F	S	E	E	N	C	Q	L	L
Query Conservation		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.									.																		.
Template Conservation																																																																								.
Template Sequence		I	I	L	Q	T	G	L	Q	Q	F	T	P	T	T	L	V	D	M	P	T	L	L	K	D	L	E	Q	A	R	E	L	G	Y	T	V	D	K	E	E	H	V	V	G	L	N	C	I	A	S	A	I	Y	D	D	V	G	S	V	V	A	A	I	S	I	S	G	P	S	S	R	.	L	T	E	D	R	F	V	S	Q
Template Known Secondary structure												S	T	T				S															T						S	S	S	S	T	T											T	T	S												T	T	T	.	S		G	G	G
Template Predicted Secondary structure																																																																								.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	I	A	D	R	I	A	I	A	V	G	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	L	V	R	D	T	A	R	D	I	S	T	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions