Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence98.82%DateThu Jan 5 12:12:26 GMT 2012
Rank123Aligned Residues206
% Identity10%Templated1sxja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360... ......370.........380.........390.........400.......
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Query Sequence  GIGDIIYQSQAMEDLLQQVDI. . . . . . . . . . . . . . . VAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAI
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Template Sequence  NLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL. . . GYDILEQNASDV
Template Known Secondary structure  SGGG

S
TTTT



TTSTTS
S
STTSST...T

TTS
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   306...310.........320.........330.........340.........350.........360.........370 .........380..
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  PASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAAT
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Template Sequence  RSKTLLNAGVKNALDN. MSVVGYFKHQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQF. . . . . . . . . . CRKTSTPLILIC
Template Known Secondary structure 

TGGGGTT
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STTTTT


SSTTS
SGGG

TTSTT..........
SS
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   383......390........ .400.........410.........420.........430......... 440.........450.
 
   488.490.........500.........510.........520.........530.........540.........550.........560.......
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Query Sequence  NRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVREL
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Template Sequence  NE. . . . . . RNLPKMRPFDRVCLDIQFRRPDANSIKS. . . . . . . . RLMTIAIREKFK. . . LDPNVIDRLIQTT. RGDIRQV
Template Known Secondary structure  S
......TTSSTTGGGTTTS




........T

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TTT.TT
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   456. ..460.........470.........480..... ....490....... ..500.........510 .......
 
   568.570.........580
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Query Sequence  ENVIERAVLLTRG
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Template Sequence  INLLSTISTTTKT
Template Known Secondary structure  TSS
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   518.520.........530
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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