Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence99.84%DateThu Jan 5 12:12:26 GMT 2012
Rank23Aligned Residues242
% Identity17%Templated1r6bx3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   321........330.........340.........350.........360.........370 .........380.........390...
Predicted Secondary structure 












.......








Query SS confidence 

















































. . . . . . .






















Query Sequence  TDLQESLQQENHQLSEQLLSNLGIGDIIYQSQAMEDLLQQVDIVAKSDST. . . . . . . VLICGETGTGKEVIARAIHQLSP
Query Conservation      
 
      
   
        


 
         
   
    
.......


 

 



   
  

  
 
Alig confidence 















.........
























.......





















.
Template Conservation        
  
   
  ......... 
 

  

  
   
                 

 



 


 

  

  
.
Template Sequence  QSDRDTLKNLGDRLKM. . . . . . . . . LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL.
Template Known Secondary structure  SSTT.........TS
S
TT
S
TTS
S
STTSS.
Template Predicted Secondary structure  .........
















.
Template SS confidence 















































































   443......450........ .460.........470.........480.........490.........500.........510..
 
   394.....400.........410.........420.........430.. .......440.........450.........460.........470..
Predicted Secondary structure 

























.












Query SS confidence 






































.







































Query Sequence  RRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHR. GRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLG
Query Conservation          
 
           


              .
    
  


 
  
  
    
  
   
         
Alig confidence  ..




































.







































Template Conservation  ..                    
 
             
          

 



          

     
      
Template Sequence  . . GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN
Template Known Secondary structure  ..T
GGG
SSSS

SSS



S
STT
SSTGGGS
STT
Template Predicted Secondary structure  ..


































Template SS confidence 















































































   513......520.........530.........540.........550.........560.........570.........580.........590
 
   473......480........ .490.........500.........510.........520.........530.........540.........550.
Predicted Secondary structure 








.






















Query SS confidence 















.






























































Query Sequence  GSRTIPVNVRVIAATN. RDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEA
Query Conservation           
 
  
 .  
  
         
   
    
 






 


  
    
              
  
Alig confidence 















.























































.





Template Conservation           
 
 
 
                   
    
       
    
    
              .      
Template Sequence  GRKADFRNVVLVMTTNAGVRAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSL. EVSQEA
Template Known Secondary structure  T
TT
SS


S
TT
S




TT.
Template Predicted Secondary structure 

























.


Template SS confidence 















































































   591........600.........610.........620.........630.........640.........650.........660... ......
 
   552..... ..560.........570.....
Predicted Secondary structure 
..




Query SS confidence 





. .

















Query Sequence  LRQLMS. . WDWPGNVRELENVIERAV
Query Conservation     
  ..
 




 

  

    
Alig confidence 





..

















Template Conservation     
         
 
 
   
   
Template Sequence  RNWLAEKGYDRAMGARPMARVIQDNL
Template Known Secondary structure 
BTTTBTTT
Template Predicted Secondary structure 






Template SS confidence 

























   687..690.........700.........710..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions