Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence99.46%DateThu Jan 5 12:12:26 GMT 2012
Rank70Aligned Residues221
% Identity19%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   346...350.........360. ........370.........380.........390.........400.........410...
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Query Sequence  DIIYQSQAMEDLLQQV. . . . . . . . . . . . DIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLE
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Template Sequence  HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . NAPFIKVEATKFTEVGYV
Template Known Secondary structure  T

S
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GGGGSS

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   16...20.........30.........40.........50.........60.........70.... .....80.........90..
 
   414.....420.........430.........440.........450. ........460.........470.........480.
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Query Sequence  SELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDL. . . . . . . . . . . . PLELQPKLLRVLQEREIERLGGSRTIPVNV
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Template Sequence  GKEVDSIIRDLTDSAGGAI. . DAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTD. HI
Template Known Secondary structure  GGSTTTTTT
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GGGGS

SS

SS

TT
T.T
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   93......100.........110. ........120.........130.........140.........150.........160....... ..
 
   482.......490.........500.........510.........520.........530.........540...... ...550........
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Query Sequence  RVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDA. . . IPTEALRQLMSW
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Template Sequence  LFIASGAF. . . QVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEA
Template Known Secondary structure 

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GGGS
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SSTT
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   304.....310. ........320.........330.........340.........350.........360.........370.........380
 
   559560.... .....570.....
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Query Sequence  DWPGNV. . . . . . . RELENVIERAV
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Template Sequence  AFRVNEKTENIGARRLHTVMERLM
Template Known Secondary structure  S


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   381........390.........400....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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