Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence99.45%DateThu Jan 5 12:12:26 GMT 2012
Rank72Aligned Residues221
% Identity15%Templated1ixsb2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.........370 .........380.........390.........400.........410.........
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Query Sequence  GIGDIIYQSQAMEDLLQQVDIVAKSDST. . . VLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGH
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Template Sequence  TLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL. . . GVNLRVTSGPAIEKPGDLAAILAN
Template Known Secondary structure  SGGGS
S
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   10.........20.........30.........40.........50.........60.. .......70.........80......
 
   420.........430.........440.........450.........460.........470.........480.........490.........
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Query Sequence  DKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQ
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Template Sequence  SLE. . . . . . . . . . . . . . . . EGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGL
Template Known Secondary structure  T

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TGGG

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   87.. 90.........100.........110.........120.........130.........140.........150
 
   500.........510.........520.........530.........540.........550.........560.........570.........
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Query Sequence  FRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTR
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Template Sequence  ITAPLLSRFGIVEHLEYY. . . TPEELAQGVMRDARLLG. . . . . . . VRITEEAALEIGRR. SRGTMRVAKRLFRRVRDFAQ
Template Known Secondary structure 
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GGGGG
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   151........160........ .170.........180..... ....190......... 200.........210.........
 
   580.........590...
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Query Sequence  . . . GNSLNLHLNVRQSR
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Template Sequence  VAGEEVITRERALEALA
Template Known Secondary structure  TS

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   220.........230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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