Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence99.20%DateThu Jan 5 12:12:26 GMT 2012
Rank87Aligned Residues205
% Identity21%Templated1iqpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  GIGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHDKG
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Template Sequence  RLDDIVGQEHIVKRLKHYVK. . TGSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEF
Template Known Secondary structure  STTT

S
..T


S
TTSSGGGTT
TT
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   23......30.........40.. .......50.........60.........70.........80.........90.........100
 
   423......430.........440.........450.........460.........470.........480.........490.........500..
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Query Sequence  AFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRS
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Template Sequence  ARTKPIGGASFK. . . . . . . IIFLDEADALTQDAQQALRRTMEMFSS. . . . . . . . . . . NVRFILSCN. . . . . . . YSSKIIE
Template Known Secondary structure  S

GGG
S
.......TGGGS
TTT...........TS.......
GGGS
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   101........110.. .......120.........130......... 140........ .150.....
 
   503......510.........520.........530.........540.........550.........560.........570.........580..
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Query Sequence  DLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNS
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Template Sequence  PIQSRCAIFRFRPLRDED. . . . . . . . IAKRLRYIAENEGLE. . . LTEEGLQAILYIA. EGDMRRAINILQAAAAL. . DKK
Template Known Secondary structure  T




........TTT
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   156...160.........170... ......180........ .190.........200. ........210........ .220.
 
   583.....
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Query Sequence  LNLHLN
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Template Sequence  ITDENV
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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