Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence99.35%DateThu Jan 5 12:12:26 GMT 2012
Rank76Aligned Residues195
% Identity18%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GDIIYQSQAMEDLLQQVDIVAKS. . . . . DST. . . VLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESEL
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Template Sequence  NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES. . . NFPFIKICSPDKMIGFSETAK
Template Known Secondary structure  T




S
SS
S
STTSS...T
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GGG
TT

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   513......520.........530.........540.........550.........560........ .570.........580.........
 
   417..420.........430.........440.........450. ........460.........470.........480......
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Query Sequence  FGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDL. . . . . . . . . . PLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAA
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Template Sequence  CQAMKKIFDDAYKSQLS. . . . . . . . CVVVDDIERLLDYVPIGPRFSNLVLQALLVLL. . . . . . . . . . KKAPPQGRKLLII
Template Known Secondary structure  TSS........

TT
BTTTTB

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Query Sequence  TNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRE
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Template Sequence  GTTSRKDVLQEMEMLNA. . . . . FSTTIHVPNIATGEQ. . . . . . . . . LLEALELLGNFKDKERTTIAQQVKGKKVWIGIKK
Template Known Secondary structure  S
TT
TTT.....SS


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   652.......660........ .670.........680... ......690.........700.........710.......
 
   567..570....
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Query Sequence  LENVIERA
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Template Sequence  LLMLIEMS
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   718.720.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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