Job Description P71229 Confidence 97.09% Date Thu Jan 5 12:12:26 GMT 2012 Rank 147 Aligned Residues 189 % Identity 17% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F
Query Conservation
Alig confidence																																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	F	A	T	L	T	D	S	L	H	Q	K	Y	G	G	C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	F	.	.	.	G	Q	N	L	G	R	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	T
Template Known Secondary structure													T	T	T	T							T	T	S	S									.	.	.	T	S	S											S	S	S	S		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1777	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.				1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.															.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.								.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.												.	.
Query SS confidence																							.	.	.	.	.	.	.												.	.
Query Sequence		E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	P	L	E	L	Q	.	.	.	.	.	.	.	P	K	L	L	R	V	L	Q	E	R	E	.	.	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y
Query Conservation																							.	.	.	.	.	.	.												.	.
Alig confidence			.	.																			.	.	.	.	.	.	.												.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	I	G	A	W	G	C	F	D	E	F	N	R	L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	N	L	K	K
Template Known Secondary structure		T	.	.	T								T	T	T	T	S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.	.	.	.	.	.	.	.	.							T
Template Predicted Secondary structure			.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1840			.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.													.	1900	.	.	.	.	.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.				.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	I	P	T	E	A	L	R	Q	L	.	.	.	M	S	W	D	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R	G	N
Query Conservation																																																			.	.	.
Alig confidence									.					.																.	.																				.	.	.							.	.
Template Conservation									.					.																.	.																													.	.
Template Sequence		S	F	R	E	F	S	M	.	K	S	Q	S	.	G	T	I	A	E	M	I	L	Q	I	M	G	F	E	D	.	.	S	K	S	L	A	S	K	I	V	H	F	L	E	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	G	.	.	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F
Template Known Secondary structure		T	T						.					.													T	S	S	.	.																					S	S	S						.	.																		S
Template Predicted Secondary structure									.					.																.	.																													.	.
Template SS confidence
		1915	.	.	.	.	1920	.		.	.	.	.		.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940			.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.			.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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