Job Description P71229 Confidence 99.79% Date Thu Jan 5 12:12:26 GMT 2012 Rank 31 Aligned Residues 231 % Identity 18% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370								.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		V	G	N	A	D	A	W	R	S	M	T	D	L	Q	E	S	L	Q	Q	E	N	H	Q	L	S	E	Q	L	L	S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	.	.	.	.	.	.	.	V	L	I	C	G	E	T	G	T	G	K	E	V
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		I	A	M	V	V	S	S	W	T	A	Q	T	E	T	D	K	L	L	N	M	E	N	I	L	H	S	.	.	.	.	.	.	.	.	.	R	V	I	G	Q	D	E	A	V	V	A	V	A	K	A	V	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E
Template Known Secondary structure																				T							T	.	.	.	.	.	.	.	.	.	T	S		S																T	T	T		S		T	T	S		S							S		T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.										.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	P	L	E	L	Q	P	K	L	L	R	V	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D	M	.	.	.	.	.	.	.	.	.	S	E	Y	M	E	K	H	S	T	S	L	T	E	K	.	.	.	.	.	.	.	V	R	R	K	P	Y	S	V	V	L	L	D	A	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L
Template Known Secondary structure												S		T	T							G	.	.	.	.	.	.	.	.	.	G	G	G		S	S									.	.	.	.	.	.	.					S	S	S							G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.										.	.	.	.	.	580	.	.	.	.	.	.	.	.								.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.						490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A	T	N	R	.	.	.	.	.	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R
Query Conservation																												.	.	.	.	.
Alig confidence													.	.	.	.	.											.	.	.	.	.																							.							.	.	.	.
Template Conservation													.	.	.	.	.																																						.							.	.	.	.
Template Sequence		E	D	G	R	L	T	T	V	D	F	R	.	.	.	.	.	N	T	I	L	I	M	T	S	N	V	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	I	D	E	I	.	I	V	F	H	E	K	.	.	.	.	K	H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K
Template Known Secondary structure				S	B					B		T	.	.	.	.	.	T								S	S	S	T	T													S						T	T	S	S			.							.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.																																						.							.	.	.	.
Template SS confidence
		635	.	.	.	.	640	.	.	.	.	.						.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.		.	.	.	.	.	.					.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
		539	540	.	.	.			.	.	.	.	.	.	550	.	.	.	.	.	.	.			.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure							.	.															.	.
Query SS confidence							.	.															.	.
Query Sequence		H	M	N	R	A	.	.	I	D	A	I	P	T	E	A	L	R	Q	L	M	S	.	.	W	D	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L
Query Conservation							.	.															.	.
Alig confidence							.	.															.	.
Template Conservation
Template Sequence		R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L	R	R	A	I	Q	K	H	V	E
Template Known Secondary structure					T	T	T															G	G	G			T	T	T	T	T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions