Job Description P71229 Confidence 99.78% Date Thu Jan 5 12:12:26 GMT 2012 Rank 35 Aligned Residues 142 % Identity 20% Template c3o5yA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a Resolution 2.45 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L	T	Q	T	L	Q	T	R	Q	P	T	L	T	H	R	A	D	D	L
Query Conservation
Alig confidence																																												.	.	.
Template Conservation																																												.	.	.
Template Sequence		X	S	L	D	D	I	I	N	N	X	I	D	K	L	K	L	L	V	H	F	D	R	I	S	F	L	L	L	A	N	E	T	L	K	L	S	H	V	Y	P	K	G	.	.	.	S	H	S	L	D	I	G	S	T	I	P	K	E	Q	S	L	Y	W	S	A	L	D	Q	R	Q	T	I	F	R	S	L	T	D	T	Q
Template Known Secondary structure																			S			S									T	T									S	T	T	.	.	.			S	S		T	T					S	T	T										T	S						S			T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	S	A	L	L	I	P	L	T	F	G	N	H	T	P	G	A	L	L	L	A	H	T	S	S	T	L	F	S	E	E	N	C	Q	L	L	Q	H	I	A	D	R	I	A	I	A	V	G	N	A	D
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		D	N	F	Y	E	K	.	.	.	Q	Y	L	A	I	L	D	L	K	S	I	L	V	I	P	I	Y	S	K	N	K	R	V	G	V	L	S	I	G	R	K	Q	Q	I	D	W	S	L	D	D	L	A	F	L	E	Q	L	T	D	H	L	A	V	S	I	E	N	V	E
Template Known Secondary structure					T	T		.	.	.					T	T	T												S	S											S	S																									T	T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		85	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions