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Job DescriptionP71229
Confidence99.86%DateThu Jan 5 12:12:26 GMT 2012
Rank21Aligned Residues214
% Identity12%Templatec3mf0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: crystal structure of pde5a gaf domain (89-518)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  GSSGMAELRFIRTHGSRFTSQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDDLI
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Template Sequence  REEVVGVAQAINKKSGNGGTFTEKDEKDFAAYLAFCGIVL. . . HNAQLYETSLLENKRNQVLLDLASLIFEEQQSLEVIL
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   275....280.........290.........300.........310.... .....320.........330.........340.........350.
 
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Query Sequence  ADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQRDP
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Template Sequence  KKIAATIISFMQVQKCTIFIVDEDCSDSFSSVFHMECEEL. . . . . . EKSINYMYAQYVKNTMEPLNIPDVSKDKRFPW. .
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Query Sequence  LLLLLASNGCESALLIPLTF. . GNHTPGALLLA. . . . . . HTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQES
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Template Sequence  . . . . . . . QCIRSLLCTPIKNGKKNKVIGVCQLVNKMEENTGKVKPFNRNDEQFLEAFVIFCGLGIQNTQMYEAVERAMAK
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   446...450.........460.........470.........480.........490.........500.........510........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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