Return to main results Retrieve Phyre Job Id

Job DescriptionP71229
Confidence99.70%DateThu Jan 5 12:12:26 GMT 2012
Rank50Aligned Residues245
% Identity24%Templatec3k1jA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp-dependent protease lon; PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   344.....350.........360.........370.........380.........390..... ....400.........
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Query Sequence  IGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRR. . . . . . . . . . . . . . DKPLVKINCAAIPA
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Template Sequence  IDQVIGQEHAVE. . . . VIKTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLEDILVFPNPEDENMPRIKTVPACQGR
Template Known Secondary structure 

S
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TTSSTS

SS


TT
TTS
TT
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   40.........50. ........60.........70.........80.........90.........100.........110.....
 
   410.. .......420 .........430. ........440........
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Query Sequence  SLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ESELFGHD. KGAFTGAINTH. . . RGRFEIADGGTLFLDEI
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Template Sequence  RIVEKYREKAKSQESVLVPKLLVDNCGRTKAPFIDATGAHAGALLGDVRHDPFLGTPAHERVEPGMIHRAHKGVLFIDEI
Template Known Secondary structure  T






TT
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GGGG

TTTSTTG
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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   449450.........460.........470...... ...480......... 490.........500.........510.......
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Query Sequence  GDLPLELQPKLLRVLQEREIERLGGSRT. . . . . . . . . . IPVNVRVIAATNR. DLWQMVEDRQFRSDLFYRLNVFPLELPP
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Template Sequence  ATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLDTVDKMHPALRSRIRGYGYEVYMRTTMPD
Template Known Secondary structure  GGS
S

B
S
TTSGGGG
B
S




S
S

S
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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   518.520.........530.........540.........550......... 560.........570.... .....580.....
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Query Sequence  LRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWD. . . . . . . . . WPGNVRELENVIERA. . . VLLTRGNSLNL
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Template Sequence  TIENRRKLVQFVAQEVKRDG. . . . . KIPHFTKEAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVER
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BBTT
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   328.330.........340....... ..350.........360.........370.........380.........390.........400..
 
   586...590.......
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Query Sequence  HLNVRQSRLLPT
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Template Sequence  EDVIEAVKMAKP
Template Known Secondary structure  T

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   403......410....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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