Job Description P71229 Confidence 98.91% Date Thu Jan 5 12:12:26 GMT 2012 Rank 111 Aligned Residues 154 % Identity 33% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

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		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.												.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	L	S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	.	.	.	.	.	.	.	.	.	.	.	K	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		E	E	S	L	N	E	V	G	Y	D	D	I	G	G	C	R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F	K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	.	.	.	G	A	F	F	F	L	I	N	G
Template Known Secondary structure						T				G	G	G			S												T														T												S	T	T	S	S													.	.	.	S	S
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.
		405	.	.				.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.				.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.												.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																																.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																																.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	.	.	.	P	A	S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	.	.	.	D	G	G	T	L	F	L	D	E	I	G	D	L	P	L	E	.	.	.	.	.	.	.	.	.	.	.	L	Q	P	K	L	L	R	V	L	Q	E	R	E
Query Conservation					.	.	.																																.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Sequence		P	E	I	M	S	K	L	A	G	E	S	E	S	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	A	F	E	E	A	E	K	N	A	P	A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	.	.
Template Known Secondary structure						T	S		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S							S	G	G	G	T		B		S	S	S																				.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.																.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure																																									.	.				.
Query SS confidence																																									.	.				.
Query Sequence		I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	.	.	R	L	N	.	V	F	P	L	E	L	P	P	L	R	D	R	P	E
Query Conservation																																									.	.				.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.												.	.				.
Template Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	K	Q	R	A	H	V	I	V	M	A	A	T	N	.	.	.	.	.	.	.	R	P	N	S	I	D	P	A	L	R	R	F	G	R	F	D	R	E	V	D	I	G	I	P	D	A	T	G	R	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	S		G	G	G									S	.	.	.	.	.	.	.		G	G	G	B		G	G	G	G	S	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
									335	.	.	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions