Job Description P71229 Confidence 99.59% Date Thu Jan 5 12:12:26 GMT 2012 Rank 60 Aligned Residues 228 % Identity 20% Template c3hteC_ PDB info PDB header:motor protein Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: crystal structure of nucleotide-free hexameric clpx Resolution 4.03 Å

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		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		H	Q	L	S	E	Q	L	L	S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	.	.	.	.	I	V	A	K	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I
Query Conservation																																	.	.	.	.
Alig confidence										.	.	.	.	.																			.	.	.	.																															.	.	.
Template Conservation										.	.	.	.	.																																																					.	.	.
Template Sequence		H	E	I	R	N	H	L	D	.	.	.	.	.	D	Y	V	I	G	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	.	.	.	D	V	P	F	T	M	A	D	A	T	T	L
Template Known Secondary structure										.	.	.	.	.	T	T	S		S																																T	T	S	S											T	T	.	.	.	T								G	G	G
Template Predicted Secondary structure										.	.	.	.	.																																																					.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.
		408	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.			.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470										.	.	.	.	.
Predicted Secondary structure				.																																											.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence				.																																											.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		P	A	.	S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	.	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	.	.	.	.	.	.	.	.	.	L	G	G	S	R
Query Conservation				.																																											.	.																				.	.	.	.	.	.	.	.	.
Alig confidence				.															.	.	.	.	.	.	.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	V	E	N	I	I	Q	K	L	L	Q	K	C	D	Y	D	.	.	.	.	.	.	.	.	.	.	.	V	Q	K	A	Q	R	G	I	V	Y	I	D	Q	I	D	K	I	S	R	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K
Template Known Secondary structure			T	T	T									T	T	T	T		.	.	.	.	.	.	.	.	.	.	.						T								G	G	G	G																			T	T	S	S									T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.			.	.	.	550	.	.
Predicted Secondary structure																																																						.																				.	.
Query SS confidence																																																						.																				.	.
Query Sequence		T	I	P	V	N	V	R	V	I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	.	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	.	.	I	P	T	E	A	L
Query Conservation																																																						.																				.	.
Alig confidence																																																						.																				.	.
Template Conservation
Template Sequence		V	I	S	H	R	V	S	E	G	E	L	L	A	Q	V	E	P	E	D	L	I	K	F	G	L	I	P	E	F	I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	F	R	D	E	A	L
Template Known Secondary structure															T										T							T	T									S												S	S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		R	Q	L	M	S	W	D	W	P	G	N	.	.	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		D	A	I	A	K	K	A	M	A	R	K	T	G	A	R	G	L	R	S	I	V	E	A	A	L	L	D	T
Template Known Secondary structure											T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions