Job Description P71229 Confidence 99.83% Date Thu Jan 5 12:12:26 GMT 2012 Rank 24 Aligned Residues 150 % Identity 16% Template c3eeaB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:gaf domain/hd domain protein; PDBTitle: the crystal structure of the gaf domain/hd domain protein2 from geobacter sulfurreducens Resolution 1.80 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	H	L	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L	T	Q	T	L	Q	T	R	Q	P	T	L	T	H	R	A
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		S	G	L	T	D	V	D	E	V	I	K	D	L	S	R	L	L	R	K	L	V	K	T	R	W	I	A	V	Y	F	F	D	R	D	F	A	P	A	R	S	T	G	L	P	A	S	F	L	P	V	F	.	R	E	M	P	L	A	P	D	K	I	P	L	L	K	S	M	L	R	K	R	Q	H	L	M	L	T	D	P
Template Known Secondary structure				S																		S			S																		S			G	G	G					.					B		T	T	T											T						S		G
Template Predicted Secondary structure																																																					.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		D	D	L	F	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	S	A	L	L	I	P	L	T	F	G	N	H	T	P	G	A	L	L	L	.	A	H	T	S	S	T	L	F	S	E	E	N	C	Q	L	L	Q	H	I	A	D	R	I	A	I	A	V	G	N	A	D	A	W	R	S
Query Conservation																																										.
Alig confidence										.	.	.	.																													.
Template Conservation										.	.	.	.
Template Sequence		G	S	S	D	L	L	T	P	.	.	.	.	K	L	R	K	L	L	R	N	L	C	V	L	A	V	P	M	V	V	R	T	Q	V	I	G	A	V	F	M	A	R	T	R	D	N	P	P	F	S	D	A	E	T	A	I	I	R	D	L	V	S	H	A	A	L	V	V	S	H	M	Q	L	F	D	E
Template Known Secondary structure		G	G		T	T	S			.	.	.	.						T	T	T											T	T												T	T	S																													T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions