Job Description P71229 Confidence 99.58% Date Thu Jan 5 12:12:26 GMT 2012 Rank 61 Aligned Residues 157 % Identity 14% Template c3e98B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution Resolution 2.43 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	W	L	N	D	E	E	Q	Q	V	A	L	R	L	L	E	K	D	R	D	H	H	R	V	L	V	D	I	T	N	A	V	L	S	H	L	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	N	I	E	X	R	H	R	L	S	Q	L	X	D	V	A	R	E	N	D	R	L	F	D	K	T	R	R	L	V	L	D	L	L	D	A	T	S	L	E	D	V	V	S	T	V	E	D	S	L	R	H	E	F	Q	V	P	Y	V	S	L	I	L	F	S	D	S	R	S	V	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																				T			S															T	S			S															.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L	T	Q	T	L	Q	T	R	Q	P	T	L	T	H	R	A	D	D	L	F	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	S	A	L	L	I	P	L	T	F	G	N	H	T	P	G	A	L	L	L	A	H	T	S	S	T	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		S	A	E	A	H	Q	A	I	G	G	L	L	S	G	K	T	V	C	G	V	L	R	P	H	E	L	A	F	L	F	G	E	S	D	R	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	A	A	V	V	S	L	S	.	F	Q	G	L	H	G	V	L	A	I	G	S	P	D	P	Q	H
Template Known Secondary structure										T	T	S									S																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S									.	S	S	S										S	S	T	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		292	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		F	S	E	E	.	N	C	Q	L	L	Q	H	I	A	D	R	I	A	I	A	V	G	N
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		Y	K	S	S	L	G	T	L	F	L	G	Y	V	A	E	V	L	A	R	V	L	P	R
Template Known Secondary structure		T	S	S	T	T	T	T														G	G	G
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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