Job Description P71229 Confidence 99.28% Date Thu Jan 5 12:12:26 GMT 2012 Rank 80 Aligned Residues 58 % Identity 22% Template c3e7lD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain Resolution 2.25 Å

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		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	A	Q	L	L	H	P	T	T	P	E	N	D	E	E	E	R	Q	R	I	V	Q	V	L	R	E	T	N	G	I	V	A	G	P	R	G	A	A	T	R	L	G	M	K	R	T	T	L	L	S	R	M	Q	R	L	G	I	S	V	R
Query Conservation
Alig confidence																																.	.	.
Template Conservation																																.	.	.
Template Sequence		S	Y	L	L	K	I	K	E	L	K	E	A	K	K	E	F	E	K	I	F	I	E	E	K	L	R	E	Y	D	Y	.	.	.	D	L	K	R	T	A	E	E	I	G	I	D	L	S	N	L	Y	R	K	I	K	S	L	N	I	R	V	K
Template Known Secondary structure		G	G	G	G	G		S																					T	T	T	.	.	.									T	T													T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions