Job Description P71229 Confidence 88.32% Date Thu Jan 5 12:12:26 GMT 2012 Rank 400 Aligned Residues 101 % Identity 11% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		314	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370																.	.	.	.	.
Predicted Secondary structure													.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	A	W	R	S	M	T	D	L	Q	.	.	.	E	S	L	Q	Q	E	N	H	Q	L	S	E	Q	L	L	S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	I	C	G
Query Conservation													.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	L	E	I	D	L	L	E	A	D	V	A	L	E	V	V	D	A	L	R	E	K	I	K	Q	K	L	V	G	K	K	V	R	I	G	T	D	K	G	K	I	I	E	E	A	V	K	E	A	V	S	E	I	L	E	T	S	R	R	I	D	L	I	E	E	I	R	K	A	E	K	P	Y	V	I	M	F	V	G
Template Known Secondary structure										T	T	T																		T	T					T	T	S																		T			S											T	S		S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q
Template Known Secondary structure			T	T	S	S															T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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