Job Description P71229 Confidence 99.77% Date Thu Jan 5 12:12:26 GMT 2012 Rank 36 Aligned Residues 159 % Identity 10% Template c3dbaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c Resolution 2.57 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.
Predicted Secondary structure																			.																																															.	.	.	.	.	.	.	.
Query SS confidence																			.																																															.	.	.	.	.	.	.	.
Query Sequence		D	H	H	R	V	L	V	D	I	T	N	A	V	L	S	H	L	.	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	.	.	.	.	.	.	.	.	C	A	C	L	P	R	C	M
Query Conservation																			.																																															.	.	.	.	.	.	.	.
Alig confidence																			.																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	C	N	I	L	F	E	L	L	T	E	I	Q	D	E	A	G	S	M	E	K	I	V	H	K	T	L	Q	R	L	S	Q	L	L	A	A	D	R	C	S	M	F	I	C	R	S	R	N	G	I	P	E	V	A	T	R	L	L	N	V	T	P	T	S	K	F	E	D	N	L	V	N	P	D	K	E	T	V	F
Template Known Secondary structure		T												S		S		T	T		T																T												S	S	S	S												T	T							B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		P	G	E	S	V	L	L	T	Q	T	L	Q	T	R	Q	P	T	L	T	H	R	A	D	D	L	F	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	S	A	L	L	I	P	L	T	F	G	N	H	T	P	G	A	L	L	L	.	A	H	T	S	S	T	L	F	S	E	E	N	C	Q	L	L	Q
Query Conservation																																																																.
Alig confidence																														.	.																																	.
Template Conservation																														.	.
Template Sequence		P	L	D	I	G	I	A	G	W	V	A	H	T	K	K	F	F	N	I	P	D	V	K	K	N	N	H	F	.	.	S	D	Y	L	D	K	K	T	G	Y	T	T	V	N	M	M	A	I	P	I	T	Q	G	K	E	V	L	A	V	V	M	A	L	N	K	L	N	A	S	E	F	S	K	E	D	E	E	V	F	K
Template Known Secondary structure			T	T	S	S									T						S	S	T	T	S	S	T	T		.	.																							T	T												S	S	S	S	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	A	D	R	I	A	I	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	L	N	F	I	S	L	V	L	R
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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