Job Description P71229 Confidence 99.20% Date Thu Jan 5 12:12:26 GMT 2012 Rank 86 Aligned Residues 220 % Identity 21% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.											.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	.	.	.	.	.	.	.	.	.	.	V	A	K	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		A	K	V	E	W	T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	.	.	.	S	A	T	F	L	N	I	S	A	A	S	L	T	S
Template Known Secondary structure		S				G	G	G	S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													T	.	.	.	T								S	T	T	T	S	S
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.	550	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.							.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	.	.	.	.	.	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V
Query Conservation																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	R	I	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	S		S																T		S							T	G	G	G	T	S	B					S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.													610	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	N	V	.	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	I	P	T	E	A	L	R	Q	L	M	S	W	D	W	P	G
Query Conservation																													.
Alig confidence							.	.	.	.	.	.	.																.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	T	N	.	.	.	.	.	.	.	R	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	N	R	L	L	.	.	.	.	.	.	.	.	.	.	.	Q	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y
Template Known Secondary structure						S	.	.	.	.	.	.	.		G	G	G	B																															.	.	.	.	.	.	.	.	.	.	.	G	G	G	S			S												T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		625	.	.	.	.								630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.												.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.								.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	.	.	.	.	.	.	.	R	G	N	S	L	N	L	H	L	N	V	R	Q	S	R	L	L	P	T	L	N	E	D
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K	R	I	R	R	S	V	A	P
Template Known Secondary structure														T	T					T																		T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions