Job Description P71229 Confidence 98.06% Date Thu Jan 5 12:12:26 GMT 2012 Rank 137 Aligned Residues 136 % Identity 15% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

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		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.							.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	.	.	.	.	.	.	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L	E	S
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	S	L	S	D	V	D	L	N	D	D	G	R	I	K	A	I	R	F	A	E	R	F	V	A	E	Y	E	P	G	K	K	M	K	G	L	Y	L	H	G	S	F	G	V	G	K	T	Y	L	L	A	A	I	A	N	E	L	A	K	R	N	V	S	S	L	I	V	Y	V	P	E	L	F	R	E	L	K	H	S
Template Known Secondary structure					S	S	S					S	T	T														T			T	T											S	S	S	S	S															S	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	.	.	G	D	L	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A	T	N	R	D	L	W
Query Conservation																																				.	.
Alig confidence				.	.	.	.	.	.	.	.																.	.								.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	.	.	.	.	.	.	.	.	D	Q	T	M	N	E	K	L	D	Y	I	K	K	V	P	.	.	V	L	M	L	D	D	L	G	A	E	A	S	S	W	V	R	D	D	V	F	G	P	I	L	Q	Y	.	.	.	.	.	.	.	.	.	.	R	M	F	E	N	L	P	T	F	F	T	S	N	F	D	M	Q
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	S	S	T												S	.	.	S								S	S									T								.	.	.	.	.	.	.	.	.	.				T	T								S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1208	.									1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.			.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250											.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.
		493	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	A	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1269	1270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions