Job Description P71229 Confidence 99.80% Date Thu Jan 5 12:12:26 GMT 2012 Rank 29 Aligned Residues 136 % Identity 18% Template c2vjwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:gaf family protein; PDBTitle: crystal structure of the second gaf domain of devs from2 mycobacterium smegmatis Resolution 2.0 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L	T	Q	T	L	Q	T	R	Q	P	T	L	T	H	R	A	D	D	L	F
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		D	P	A	T	V	F	R	L	V	A	A	E	A	L	T	L	T	G	A	D	G	T	L	V	A	V	P	A	D	A	A	E	E	L	V	I	V	E	V	A	G	A	V	P	A	E	V	E	A	S	A	.	.	I	P	V	Q	D	N	A	I	G	Q	A	F	R	D	R	A	P	R	R	L	D	V	L	D	G	P	G
Template Known Secondary structure			T																		S												S										T	S		G	G	G	T	T			.	.			S	S	S	S															S				T	T	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	S	A	L	L	I	P	L	T	F	G	N	H	T	P	G	A	L	L	L	A	.	H	T	S	S	T	L	F	S	E	E	N	C	Q	L	L	Q	H	I	A	D	R	I	A	I	A	V	G	N	A	D	A	W	R	S	M
Query Conservation																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	P	A	L	V	L	P	L	R	A	T	D	T	V	A	G	V	L	V	A	V	Q	G	S	G	A	R	P	F	T	A	E	Q	L	E	X	X	T	G	F	A	D	Q	A	A	V	A	W	Q	L	A	S	S	Q	R	R	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T												T	T																																T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions