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Job DescriptionP71229
Confidence98.88%DateThu Jan 5 12:12:26 GMT 2012
Rank116Aligned Residues194
% Identity20%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.... .....370.........380.........390.........400.........410........
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Query Sequence  GIGDIIYQSQAMEDLLQQVDIV. . . . AKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFG
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Template Sequence  SFKDVAGMHEAKLEVREFVDYLKSPEAKVPKGALLLGPPGCGKTLLAKAVATEA. . . QVPFLAMAGAEFVE. . . . . . . . .
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TTSS
S








S
TTSS...T

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   307..310.........320.........330.........340.........350.........360 .........370....
 
   419420.........430.........440.........450.........460.........470.........480.........490.. ...
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Query Sequence  HDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLW. . . QMV
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Template Sequence  VIGGLGAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGMGTTD. . . . . . . . . . . . . HVIVLASTNRADILDGALM
Template Known Secondary structure  SSTTT
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GGGGGSGGG
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   381........390.........400.........410.........420........ .430.........440.......
 
   496...500.........510.........520.........530.........540.........550.........560.........570.....
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Query Sequence  EDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAV
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Template Sequence  RPGRLD. . . . . . . RHVFIDLPTLQERR. . . . EIFEQHLKSL. . . . . . KLTQSSTFYSQRLAELTPGFSGADIANICNEAA
Template Known Secondary structure  STTS

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BTT
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   467..470.. .......480...... ...490...... ...500.........510.........520.........
 
   576..
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Query Sequence  LLT
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Template Sequence  LHV
Template Known Secondary structure  T

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   530..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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