Job Description P71229 Confidence 98.89% Date Thu Jan 5 12:12:26 GMT 2012 Rank 113 Aligned Residues 215 % Identity 20% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.									.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																			.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																													.	.																			.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	.	.	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	.	.	.	.	.	.	.	.	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	.	.	.	.
Query Conservation																													.	.																			.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence																													.	.																			.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		F	K	E	I	P	F	R	E	D	I	L	R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G	T	P	Q	A
Template Known Secondary structure			S	S		T	T																	T	T												T	T	S	S																			S	S	S	S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
				410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.				.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure		.	.																												.	.	.															.
Query SS confidence		.	.																												.	.	.															.
Query Sequence		.	.	S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	.	.	.	I	A	D	G	G	T	L	F	L	D	E	I	G	D	.	L	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V
Query Conservation		.	.																												.	.	.															.
Alig confidence		.	.																												.	.	.															.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	A	.	.	.	.	.	.	.	.	.	.	.	N	I	S	V
Template Known Secondary structure													S				S	S	S	S		T												S	S	S								T	T						S	T	T	S									T	S	S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.												.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.			.	.	.	.	560	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	I	P	T	E	A	L	R	Q	L	.	.	M	S	W	D	W	P
Query Conservation																																																																										.	.
Alig confidence										.	.	.	.																	.									.	.																.	.	.	.	.														.	.
Template Conservation										.	.	.	.																	.									.	.																.	.	.	.	.
Template Sequence		I	M	I	S	N	D	I	N	.	.	.	.	V	R	D	Y	M	E	P	R	V	L	S	S	L	G	P	S	.	V	I	F	K	P	Y	D	A	.	.	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	G	L	.	.	.	.	.	I	K	G	T	Y	D	D	E	I	L	S	Y	I	A	A	I	S	A	K	E	H
Template Known Secondary structure						S	S	T	T	.	.	.	.	T	T	T	T	S							T					.									.	.														T	S	.	.	.	.	.		T	T	S			S												T	T
Template Predicted Secondary structure										.	.	.	.																	.									.	.																.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	A	R	K	A	V	N	L	L	F	R	A	A	Q	L	A	S	G	G
Template Known Secondary structure																		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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