Job Description P71229 Confidence 98.84% Date Thu Jan 5 12:12:26 GMT 2012 Rank 121 Aligned Residues 225 % Identity 13% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		S	E	Q	L	L	S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	.	.	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		R	E	Y	L	L	P	D	Y	I	P	D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R	Q	I	D	T
Template Known Secondary structure		G	G	G	G	S	S	S				S			T	T											S	S	G	G	G	G	G	T												T	T	S	S																T		S	S													S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.													.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	.	.	.	.	.	.	.	.	.	.	.	.	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		P	Y	R	V	L	A	D	L	L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	.	.	.	.	.	.	.	.	I	N	S	E	V	N	K
Template Known Secondary structure										T	T	T	T	S					S	S	S																T			S								T							S	S		S	T								.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		V	R	V	I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	I	P	T	E	A	L	R	Q	L	M	S	.	.	W
Query Conservation																																																																															.	.
Alig confidence													.	.	.	.																										.	.																.	.	.	.	.																.	.
Template Conservation													.	.	.	.																										.	.																.	.	.	.	.
Template Sequence		I	S	F	I	G	I	T	N	D	V	K	.	.	.	.	F	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	.	.	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	F	.	.	.	.	.	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A
Template Known Secondary structure									S		G	G	.	.	.	.	G	G	G	G		T	T					T	T	T	T											.	.															B	.	.	.	.	.		S	S		S
Template Predicted Secondary structure													.	.	.	.																										.	.																.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	H	G	D	A	R	R	A	L	D	L	L	R	V	S	G	E	I	A
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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