Job Description P71229 Confidence 99.72% Date Thu Jan 5 12:12:26 GMT 2012 Rank 49 Aligned Residues 169 % Identity 12% Template c2oolA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the chromophore-binding domain of an unusual2 bacteriophytochrome rpbphp3 from r. palustris Resolution 2.20 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	D	H	H	R	V	L	V	D	I	T	N	A	V	L	S	H	L	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	E	F	F	R	S	V	R	V	A	I	R	R	L	Q	T	A	A	D	L	P	T	A	C	W	I	A	A	S	E	V	R	R	I	T	G	F	D	R	I	K	V	Y	Q	F	A	A	D	W	S	G	Q	V	I	A	E	D	R	D	S	G	I	P	S	L	L	D	F	H	F	P	S	S	D	I	P	A	Q	S
Template Known Secondary structure																		T			S																			S									T	T	S											T	T					T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	T	L	Q	T	R	Q	P	T	L	T	H	R	A	D	D	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	S	A	L	L	I	P	L	T	F	G	N	H	T	P	G	A	L	L	L	A	H	T
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	Y	T	I	N	P	V	R	I	I	P	D	I	G	Y	R	P	S	P	L	V	P	D	I	N	P	R	L	G	G	P	I	D	L	S	F	S	V	L	R	S	V	S	P	T	H	L	E	Y	M	V	N	M	G	M	H	A	A	M	S	I	S	I	V	R	D	N	R	L	W	G	M	I	S	C	H	N	L
Template Known Secondary structure								S						S		T	T								S				T	T	T		S	S				T	T		T	T	B														T												T	T											S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	T	L	F	S	E	E	N	C	Q	L	L	Q	H	I	A	D	R	I	A	I	A	V	G	N	A	D	A	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	R	F	V	S	Y	E	V	R	Q	A	C	E	L	I	A	Q	V	L	T	W	Q	I	G	V	L	E	E	A	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions