Job Description P71229 Confidence 98.38% Date Thu Jan 5 12:12:26 GMT 2012 Rank 133 Aligned Residues 234 % Identity 15% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370								.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.							.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																						.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		S	E	Q	L	L	S	N	L	G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	.	.	.	.	.	.	.	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	.	.	.	.	.	.	S	P	R	R	D	K	P	L	V	K
Query Conservation																																						.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	V	F	D	E	N	Y	I	P	P	E	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y
Template Known Secondary structure		G	G	G	G	S	T	T				S	S		S	S	S	S																	T													T	T			S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		402	.	.	.	.	.	.	.						410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.					.	.	.	440	.	.	.	.	.	.	.	.	.	450							.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Query Sequence		I	N	C	A	A	I	P	A	.	.	.	.	.	S	L	L	E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	.	.	.	.	I	A	D	G	G	T	L	F	L	D	E	I	G	D	.	.	.	.	.	.	L	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R
Query Conservation										.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Alig confidence										.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	A	F	N	A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	I
Template Known Secondary structure				G	G	G			S													T						T	T																		T									S	T					S		T	T	S										T					S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																							.								.	.
Template Conservation		.	.	.	.	.	.	.																																							.								.	.
Template Sequence		.	.	.	.	.	.	.	P	S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	.	L	H	L	P	A	Y	K	.	.	S	R	E	L	Y	T	I	L	E	Q	R	A	E	L	G	L	R	D	T	V	W	E	P	R	H
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	S													T															T	T		S			.								.	.																B		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.																																							.								.	.
Template SS confidence
									172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	T	E	A	L	R	Q	L	M	S	W	D	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	I	S	D	V	Y	G	E	D	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A
Template Known Secondary structure											G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions