Job Description P71229 Confidence 99.15% Date Thu Jan 5 12:12:26 GMT 2012 Rank 90 Aligned Residues 58 % Identity 16% Template c1umqA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity Resolution UNK

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		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	S	S	M	A	Q	L	L	H	P	T	T	P	E	N	D	E	E	E	R	Q	R	I	V	Q	V	L	R	E	T	N	G	I	V	A	G	P	R	G	A	A	T	R	L	G	M	K	R	T	T	L	L	S	R	M	Q	R	L	G	I
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		A	K	G	E	S	L	P	P	P	P	E	N	P	M	S	A	D	R	V	R	W	E	H	I	Q	R	I	Y	E	M	C	D	R	.	.	.	N	V	S	E	T	A	R	R	L	N	M	H	R	R	T	L	Q	R	I	L	A	K	R	S	P
Template Known Secondary structure				T	T	S	S				S		S	S	S																	T	T	S	.	.	.										T	S											T	S	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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