Job Description P71229 Confidence 91.93% Date Thu Jan 5 12:12:26 GMT 2012 Rank 310 Aligned Residues 156 % Identity 17% Template c1mkmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr Resolution 2.20 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	V	D	I	T	N	A	V	L	S	H	L	D	L	D	D	L	I	A	D	V	A	R	E	I	H	H	F	F	G	L	A	S	V	S	M	V	L	G	D	H	R	K	N	E	K	F	S	L	W	C	S	D	L	S	A	S	H	C	A	C	L	P	R	C	M	P	G	E	S	V	L	L	T	Q	T	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																.																																															.	.	.
Template Conservation																																.
Template Sequence		L	I	E	Y	G	S	F	V	L	R	R	F	N	I	R	D	I	A	H	D	H	L	V	D	I	M	K	R	T	G	.	E	T	V	H	L	I	L	K	D	G	F	E	G	V	Y	I	D	K	V	E	G	E	Q	S	I	P	M	V	S	R	L	G	M	K	V	D	L	Y	S	T	A	S	G	K	S	I	L	A	F
Template Known Secondary structure																													T	T		.	S									S	S											T	T	S				S			S	S					S	S	S	S
Template Predicted Secondary structure																																.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
												234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Q	T	R	Q	P	T	L	T	H	R	A	D	D	L	F	L	W	Q	R	D	P	L	L	L	L	L	A	S	N	G	C	E	.	.	.	.	.	.	.	.	.	.	S	A	L	L	I	P	L	T	.	F	G	N	H	T	P	G	A	L	L	L	A	H	T	S	S	T	L	F
Query Conservation		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.									.																		.
Template Conservation																																																																																.
Template Sequence		V	P	E	K	E	L	K	E	Y	L	K	I	V	E	L	K	P	K	T	P	N	T	I	T	N	P	R	V	L	K	R	E	L	E	K	I	R	K	R	G	Y	A	V	D	N	E	E	N	E	I	G	I	M	C	V	G	V	P	I	F	D	H	N	G	Y	P	V	A	G	V	S	I	S	G	V	A	R	K	.	F
Template Known Secondary structure		S																	S	S	T	T																			S	S					S	S	S	S	T	T											T	T	S												G	G	G	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	E	N	C	Q	L	L	Q	H	I	A	D	R	I	A	I	A	V	G	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	E	K	I	E	E	Y	S	D	V	L	K	E	K	A	E	E	I	S	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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