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Job DescriptionP71229
Confidence99.89%DateThu Jan 5 12:12:26 GMT 2012
Rank11Aligned Residues222
% Identity14%Templatec1mc0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:3',5'-cyclic nucleotide phosphodiesterase 2a; PDBTitle: regulatory segment of mouse 3',5'-cyclic nucleotide phosphodiesterase2 2a, containing the gaf a and gaf b domains
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  VLLGSSGMAELRFIRTHGSRFTSQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLD
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Template Sequence  RATDQVVALACAFNKLGGDFFTDEDEHVIQHCFHYTGTVLTSTLAFQKEQKLKCECQ. . . . . . ALLQVAKNLFTHLDDVS
Template Known Secondary structure  TTT
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   331........340.........350.........360.........370.........380....... ..390.........400....
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  DLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQ
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Template Sequence  VLLQEIITEARNLSNAEICSVFLLDQNELVAKVFDGGVVDDESY. . . EIRIPADQGIAGHVATTGQILNIPDAYAHPLF.
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   405....410.........420.........430.........440........ .450.........460.........470.........480
 
   252.......260.........270.... .....280..... ....290.........300.........310.........320....
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Query Sequence  RDPLLLLLASNGCESALLIPLTF. GNHTPGALLLA. HTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQ
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Template Sequence  . YRGVDDSTGFRTRNILCFPIKNENQEVIGVAELVNKINGPWFSKFDEDLATAFSIYCGISIAHSLLYKKVNEAQ
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   481........490.........500.........510.........520.........530.........540.........550....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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