Job Description P71229 Confidence 98.89% Date Thu Jan 5 12:12:26 GMT 2012 Rank 112 Aligned Residues 209 % Identity 20% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.											.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	.	.	.	.	.	.	.	.	.	.	A	K	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																																														.	.	.
Template Sequence		T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	R	V	P	F	I	T	A	S	G	S	D	F	V	E	M	F	V
Template Known Secondary structure			G	G	G	S	S	S																								T	T													T	T	S	S												T	.	.	.	T														S	T	T
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.							.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		E	S	E	L	F	G	H	D	K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	.	.	.	.	.	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A
Query Conservation																																									.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	A	.	.	.	.	.	.	.	.	.	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	.	.	.	.	.	.	.	.	.	G	F	E	K	D	T	A	I	V	V	M	A	A
Template Known Secondary structure		T				.	.	.	.	.	.	.	.	.												T	S		S							T																							T	.	.	.	.	.	.	.	.	.	T			T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.										.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.		.	.
Predicted Secondary structure																								.																																																							.
Query SS confidence																								.																																																							.
Query Sequence		T	N	R	D	L	W	Q	M	V	E	D	R	Q	F	R	S	D	L	F	Y	R	L	.	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	I	P	T	E	A	L	R	Q	L	M	S	W	D	W	P	G	.	N	V
Query Conservation																								.																																																							.
Alig confidence				.	.	.	.	.	.	.														.													.	.												.	.	.	.	.	.	.	.																		.				.
Template Conservation				.	.	.	.	.	.	.																											.	.												.	.	.	.	.	.	.	.																		.
Template Sequence		T	N	.	.	.	.	.	.	.	R	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	.	.	K	G	R	E	Q	I	L	R	I	H	A	.	.	.	.	.	.	.	.	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	.	T	P	G	F	V	G
Template Known Secondary structure			S	.	.	.	.	.	.	.		T	T	S	S						S	T	T	S	S												.	.												.	.	.	.	.	.	.	.	T	T	S		B		T	T									T	.		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.																											.	.												.	.	.	.	.	.	.	.																		.
Template SS confidence
		301	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.				.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		R	E	L	E	N	V	I	E	R	A	V	L	L	T	.	.	.	R	G	N	S	L	N	L	H	L	N	V	R
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E
Template Known Secondary structure																		T	T			S	B
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions