Job Description P71229 Confidence 98.85% Date Thu Jan 5 12:12:26 GMT 2012 Rank 120 Aligned Residues 192 % Identity 20% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		G	I	G	D	I	I	Y	Q	S	Q	A	M	E	D	L	L	Q	Q	V	D	I	V	A	K	S	D	S	T	V	L	I	C	G	E	T	G	T	G	K	E	V	I	A	R	A	I	H	Q	.	.	L	S	P	R	R	D	K	P	L	V	K	I	N	C	A	A	I	P	A	S	L	L	E	S	E	L	F	G	H	D
Query Conservation																																																		.	.
Alig confidence																												.	.																					.	.
Template Conservation																												.	.
Template Sequence		R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	H	.	.	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V	K	E	F
Template Known Secondary structure		S	G	G	G			S													T	T	T					.	.					S		T	T	S	S	T	T												G	G	G										T	T	T	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	F	T	G	A	I	N	T	H	R	G	R	F	E	I	A	D	G	G	T	L	F	L	D	E	I	G	D	L	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	R	E	I	E	R	L	G	G	S	R	T	I	P	V	N	V	R	V	I	A	A	T	N	R	D	L	W	Q	M	V	E	D	R	Q	F
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		A	R	T	K	P	I	G	G	A	S	F	K	.	.	.	.	.	.	.	.	.	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	S	.	.	.	.	.	.	.	.	.	.	.	N	V	R	F	I	L	S	C	N	.	.	.	.	.	.	.	Y	S	S	K	I
Template Known Secondary structure		T	T	S			S	S	S		S			.	.	.	.	.	.	.	.	.						T	G	G	G	S															T	T	T	.	.	.	.	.	.	.	.	.	.	.	T								S	.	.	.	.	.	.	.		G	G	G	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.	.	.	.	.								.	150	.	.	.
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	D	L	F	Y	R	L	N	V	F	P	L	E	L	P	P	L	R	D	R	P	E	D	I	P	L	L	A	K	H	F	T	Q	K	M	A	R	H	M	N	R	A	I	D	A	I	P	T	E	A	L	R	Q	L	M	S	W	D	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.													.	.	.														.
Template Conservation																									.	.	.	.	.	.	.	.													.	.	.														.
Template Sequence		I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	.	.	.	.	.	.	.	.	R	L	R	Y	I	A	E	N	E	G	L	E	.	.	.	L	T	E	E	G	L	Q	A	I	L	Y	I	A	.	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A
Template Known Secondary structure							T	T																	.	.	.	.	.	.	.	.										T			.	.	.														.	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.													.	.	.														.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions