 |
Job Description | P76129 | Confidence | 94.63% | Date | Thu Jan 5 12:19:21 GMT 2012 |
Rank | 94 | Aligned Residues | 82 |
% Identity | 10% | Template | d2veaa3 |
SCOP info | Profilin-like
| PYP-like sensor domain (PAS domain)
| BphP N-terminal domain-like
|
Resolution | 2.21 |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | N | M | M | G | A | V | L | I | N | . |
E | N | D | E | V | M | F | F | N | P | A | A | E | K | L | W | G | Y | K | R | E | E | V | I | G | N | N | I | D | M | L | I | P | R | D | L | R | P | A | H | P | E | Y | I | R | H | N | R | E | G | G | K | A | R | V | E | G | M | S | R | E | L | Q | L | E | K | K | D | G |
Query Conservation |   |
  |   |
|   |
|
|   |
|   |
| . |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|
Template Sequence |   |
Q | P | H | G | L | V | V | V | L | Q | E | P | D | L | T | I | S | Q | I | S | A | N | C | T | G | I | L | G | R | S | P | E | D | L | L | G | R | T | L | G | E | V | F | D | S | F | L | T | A | G | Q | I | S | S | L | N | P | S | K | L | W | A | R | V | M | D | F | V | I | F | D | G | V | F | H | R | N | S | D | G |
Template Known Secondary structure |   |
| T | T | S |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |
| T | T |  |  |  |  | T | S |
|
| T | T | T | S | S | T | T | T | T | T | T | T | S | B |
|
|
|
|
| T | T |  |  |  |  | S | S |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
99 | 100 | . |
Predicted Secondary structure |   |
|  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
S | K | I |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |
|
|
Template Sequence |   |
L | L | V |
Template Known Secondary structure |   |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
117 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|