Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence99.79%DateThu Jan 5 12:19:21 GMT 2012
Rank28Aligned Residues126
% Identity27%Templated1ew0a_
SCOP infoProfilin-like PYP-like sensor domain (PAS domain) Heme-binding PAS domain
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGG
Query Conservation      

   

   
  

  
 

 
 
  
 
   
     
 
    

 
     
                    
Alig confidence 















































































Template Conservation     
 

  

     
 
     
   
  
 
   
               
                          
Template Sequence  LETEDVVRARDAHLRSILDTVPDATVVSATDGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQRYMATG
Template Known Secondary structure  TS
TT
SSTTSB



TTSBGGGGS
TTTGGG
Template Predicted Secondary structure 





























Template SS confidence 















































































   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   81........90.........100.........110.........120......
Predicted Secondary structure 













Query SS confidence 













































Query Sequence  KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS
Query Conservation           
      

    
                    


Alig confidence 













































Template Conservation           
      

    
      
             


Template Sequence  EKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSGGERFFTGFIRDLT
Template Known Secondary structure 

SSTTS

TTS
TT

Template Predicted Secondary structure 













Template SS confidence 













































   206...210.........220.........230.........240.........250.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions