Job Description P76129 Confidence 100.00% Date Thu Jan 5 12:19:21 GMT 2012 Rank 6 Aligned Residues 238 % Identity 27% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

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		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		E	R	L	V	L	G	A	A	L	K	E	A	I	S	N	N	Q	L	K	L	V	Y	Q	P	Q	I	F	A	E	T	G	E	.	L	Y	G	I	E	A	L	A	R	W	H	D	P	L	H	G	H	V	P	P	S	R	F	I	P	L	A	E	E	I	G	E	I	E	N	I	G	R	W	V	I	A	E	A	C	R	Q
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		D	H	H	A	W	H	R	L	L	D	R	A	L	S	E	Q	H	F	Q	L	Y	F	Q	P	V	V	A	A	R	D	T	H	L	V	L	H	Y	K	V	L	S	R	L	L	D	E	Q	G	Q	T	I	P	A	G	R	F	L	P	W	L	E	R	F	G	W	T	S	R	L	D	L	L	X	L	E	Q	V	L	R	Q
Template Known Secondary structure																	T												S	S		T	T	S													T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	W	R	S	Q	N	I	H	I	P	A	L	S	V	N	L	S	A	L	H	F	R	S	N	Q	L	P	N	Q	V	S	D	A	M	H	A	W	G	I	D	G	H	Q	L	T	V	E	I	T	E	S	M	M	M	E	H	D	T	E	I	F	K	R	I	Q	I	L	R	D	M	G	V	G	L	S	V	D	D
Query Conservation
Alig confidence						.	.	.	.	.	.																																															.
Template Conservation						.	.	.	.	.	.																																															.
Template Sequence		X	A	S	H	.	.	.	.	.	.	E	D	C	L	A	L	N	L	S	A	A	T	L	A	D	P	H	A	L	N	R	V	F	E	I	L	R	Q	H	S	D	L	G	P	R	L	T	L	E	I	G	E	E	Q	L	P	.	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R
Template Known Secondary structure		G	G	G		.	.	.	.	.	.																													T	G	G	G	T	T	T							S	S	S			.																T
Template Predicted Secondary structure						.	.	.	.	.	.																																															.
Template SS confidence
		489	490	.	.							.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	T	G	F	S	G	L	S	R	L	V	S	L	P	V	T	E	I	K	I	D	K	S	F	V	D	R	C	L	T	E	K	R	I	L	A	L	L	E	A	I	T	S	I	G	Q	S	L	N	L	T	V	V	A	E	G	V	E	T	K	E	Q	F	E	M	L	R	K	I	H	C	R	V	I	Q	G	Y	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	G	R	F	S	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	D	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I	A	E	R	V	E	T	E	G	E	L	Q	V	I	R	E	X	G	L	Y	G	V	Q	G	Q	L	F
Template Known Secondary structure			T	T	T	G	G	G	G	G	G					T		S						G	G	G	G	T	T	T	T	T		T																T	T										S											T		S				S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		779	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	P	A	P	W
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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