Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence99.10%DateThu Jan 5 12:19:21 GMT 2012
Rank75Aligned Residues105
% Identity10%Templatec3njaC_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:probable ggdef family protein; PDBTitle: the crystal structure of the pas domain of a ggdef family protein from2 chromobacterium violaceum atcc 12472.
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSK
Query Conservation   
 

 
 
  
 
   
     
 
    

 
     
                             
      

  
Alig confidence 







































..





































Template Conservation 
 

 
  
        
     
 
              ..                                   
  
Template Sequence  AGIGSWVLHXESGRLEWSQAVHDIFGTDSATFDATEDAYF. . QRVHPDDRARVRRELDRHVLGDRPFDVEYRIVRPDGQV
Template Known Secondary structure 





TTT
B
T

TTT


B..TTS
TTTTS



TTS
Template Predicted Secondary structure 
















..















Template SS confidence 















































































   13......20.........30.........40.........50.. .......60.........70.........80.........90
 
   101........110..... ....120.......
Predicted Secondary structure 


..
Query SS confidence 














. .











Query Sequence  IWTRFALSKVSAEGK. . VYYLALVRDASV
Query Conservation    
            ..        



Alig confidence 














..











Template Conservation             
  
      
   



Template Sequence  RELLERNHIQRQASGQVDHLWGTVIDXTE
Template Known Secondary structure 
TTS



Template Predicted Secondary structure 







Template SS confidence 




























   91........100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions