Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence99.97%DateThu Jan 5 12:19:21 GMT 2012
Rank15Aligned Residues160
% Identity19%Templatec3mtkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:diguanylate cyclase/phosphodiesterase; PDBTitle: x-ray structure of diguanylate cyclase/phosphodiesterase from2 caldicellulosiruptor saccharolyticus, northeast structural genomics3 consortium target clr27c
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400 .........410.........420.........430.........440........
Predicted Secondary structure 














..



















Query SS confidence 





























. .















































Query Sequence  HIEQLIQFDPMTGLPNRNNLHNYLDDLVDK. . AVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC
Query Conservation   
   
  
 



 

      
      ..     
  



 

 


  

  

 

  

  
    
  
 

Alig confidence 





























..















































Template Conservation   
   
  
 



 

  
   
             
  
 
     
    
    
  
   
  
           
Template Sequence  KLEFLAFYDELTGLPNKNSLIRWLNLKVSQXDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKAF
Template Known Secondary structure 
B
TTT
SB
SS

TTTT

SSS
Template Predicted Secondary structure 





















Template SS confidence 















































































   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   449450.........460.........470.........480.........490.........500.........510.........520........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  RIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQ
Query Conservation 






 


       
  

  
   
            

 




         

  

 


 

  
 
   
Alig confidence 














...


































..
























Template Conservation 
   
 
 

     ...                           




   ..    
   
  

  

  
 
   
Template Sequence  KIGFDRFAIICKSEN. . . ISDFIERXLSQLLLPYNVNGNLIRVNFNIGAAQIE. . AAANLXRRCDLALIKAKEEGLNEYV
Template Known Secondary structure  TT
SS...TS
TT




..

TT
Template Predicted Secondary structure 





...









..




Template SS confidence 















































































   266...270.........280 .........290.........300.........310..... ....320.........330.........340
 
   529530.. ...
Predicted Secondary structure 


.
Query SS confidence 



.


Query Sequence  FFSP. AMN
Query Conservation   
  .   
Alig confidence 



.


Template Conservation   
 
 
  
Template Sequence  IFKPIEIQ
Template Known Secondary structure 


Template Predicted Secondary structure 



Template SS confidence 







   345....350..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions