 |
Job Description | P76129 | Confidence | 33.18% | Date | Thu Jan 5 12:19:21 GMT 2012 |
Rank | 409 | Aligned Residues | 57 |
% Identity | 23% | Template | c3l5aA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; |
PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus
|
Resolution | 1.65 Å |
|
 |
  |   |
418 | . | 420 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | S | L | G | Y | A | W | A | D | . |
. |
. |
. |
. |
. |
Q | A | L | L | E | V | V | N | R | F | R | E | K | L | K | P | D | Q | . |
. |
. |
. |
. |
Y | L | C | R | I | E | G | T | Q | F | V | L | V | S | L | E | N | D | V | S | N | I | T | Q | I | A | D | E | L | R | N | V |
Query Conservation |   |
|
|   |   |
|
|   |   |
|
| . | . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
| . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
| . | . | . |
|   |
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
T | D | H | Y | G | . |
. |
. |
A | D | S | L | K | N | R | A | R | L | C | L | E | V | X | R | A | V | Q | E | V | I | D | K | E | A | P | D | N | F | I | L | G | F | R | A | T | P | E | E | T | R | G | S | D | L | G | Y | T | I | D | E | F | N | Q | L | I | D | W | V | X | D | V |
Template Known Secondary structure |   |
| S | T | T | S | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |
| S |
|  |  |  | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | |
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|