Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence24.09%DateThu Jan 5 12:19:21 GMT 2012
Rank466Aligned Residues141
% Identity13%Templatec3l12A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi dss-3 at3 1.60 a resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   612.......620.........630....... ..640.........650.........660.........670.........680.....
Predicted Secondary structure 






......







Query SS confidence 

























. . . . . .















































Query Sequence  IAEACRQLAEWRSQNIHIPALSVNLS. . . . . . ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ
Query Conservation                        

 
......   
                      
  

 
               
Alig confidence 














...







......






























.......









Template Conservation 
 


          ...  
 



                      
        
   

.......    
     
Template Sequence  LGELLDLCAGYGDQA. . . PYLLLELKSDPALXHDHAARAEXVAAVLADVRRYRXEPRTVXHSF. . . . . . . DWALLGECRR
Template Known Secondary structure  TTGGG
...



GGGTT
TT
GGGS.......
Template Predicted Secondary structure 




...



















.......
Template SS confidence 















































































   128.130.........140.. .......150.........160.........170.........180....... ..190.......
 
   686...690.........700. ........710.........720.........730.........740.........750.........
Predicted Secondary structure 






......

















Query SS confidence 















. . . . . .

























































Query Sequence  ILRDMGVGLSVDDFGT. . . . . . GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK
Query Conservation   
   
     



 ......
 

   
       



                   
            




  
Alig confidence 















......
























............




















Template Conservation                                                 ............  
      

 
  



  
Template Sequence  QAPDLPTSYLSQLPEGPDYDRXTESLPQAVASAGGQLWCPYFLDVTP. . . . . . . . . . . . ELVAEAHDLGLIVLTWTVNEP
Template Known Secondary structure 
TTS







TTT

S
T
SBGGG

............TT
B


S
Template Predicted Secondary structure 



















............






Template SS confidence 















































































   198.200.........210.........220.........230.........240.... .....250.........260.....
 
   760.........770....
Predicted Secondary structure 



Query SS confidence 














Query Sequence  EQFEMLRKIHCRVIQ
Query Conservation       
   
    
Alig confidence 














Template Conservation           





Template Sequence  EDIRRXATTGVDGIV
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



Template SS confidence 














   279280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions