Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence100.00%DateThu Jan 5 12:19:21 GMT 2012
Rank3Aligned Residues249
% Identity26%Templatec3hvbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   538.540.........550.........560.........570.........580.........590.........600.........610.......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACR
Query Conservation            
  
          

            


 
          
  
    
           
      
Alig confidence 















































































Template Conservation 
  
      
  

      
  



   
  
   
 
 
        
    
            

   
     
Template Sequence  AAQRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIK
Template Known Secondary structure 





T


SSS

S
TTSS
TST
Template Predicted Secondary structure 



















Template SS confidence 















































































   437..440.........450.........460.........470.........480.........490.........500.........510......
 
   618.620.........630.........640.........650.........660.........670.........680.........690.......
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  QLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD
Query Conservation                  

 
   
                      
  

 
                
   
     
Alig confidence 








.





































































Template Conservation   
       .    
 



   
        
   
         




 
             
  
   
  



Template Sequence  LLAEHRAKG. HQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAIS
Template Known Secondary structure  TTT.




TTTTTTGGGT

TT
TTT
Template Predicted Secondary structure 

.


















Template SS confidence 















































































   517..520..... ....530.........540.........550.........560.........570.........580.........590.....
 
   698.700.........710.........720.........730.........740.........750.........760.........770.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF
Query Conservation 


 
 

   
       



                   
            




       
   
    

  
Alig confidence 

































.












































Template Conservation 


     
  
  
  
 



           .    
   
         


 


       
   
    

  
Template Sequence  QFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQVE. NQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYY
Template Known Secondary structure  T
SSSTTGGGGTS

S
GGGGSSTTS.TT




ST
S

TT
Template Predicted Secondary structure 
















.














Template SS confidence 















































































   596...600.........610.........620......... 630.........640.........650.........660.........670....
 
   778.780........
Predicted Secondary structure 





Query SS confidence 










Query Sequence  FSRPLPAEEIP
Query Conservation     
       
Alig confidence 










Template Conservation     
    

 
Template Sequence  LQGPSQAMDYD
Template Known Secondary structure  T


BSS



Template Predicted Secondary structure 







Template SS confidence 










   675....680.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions