Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence100.00%DateThu Jan 5 12:19:21 GMT 2012
Rank4Aligned Residues253
% Identity26%Templatec3hv9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx eal domain from pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   533......540.........550.........560.........570.........580.........590.........600.........610..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI
Query Conservation                 
  
          

            


 
          
  
    
           
 
Alig confidence 















































































Template Conservation             
   
  

      
 




      
 
 
 
 
             
   
    
   
    
Template Sequence  EELAAAAQRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVI
Template Known Secondary structure  TT
TTTT
SS


SB
TTS
B

TT
Template Predicted Secondary structure 






















Template SS confidence 















































































   432.......440.........450.........460.........470.........480.........490.........500.........510.
 
   613......620.........630.........640.........650.........660.........670.........680.........690..
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV
Query Conservation                       

 
   
                      
  

 
                
   
 
Alig confidence 















.






























































Template Conservation                  .  
 


    
        
   
         
 


 
             
  
   
 
Template Sequence  LNSIKLLAEHRAKGHQ. TKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHC
Template Known Secondary structure  TT

.

T
TTTT

SS
TTT
Template Predicted Secondary structure 



.




















Template SS confidence 















































































   512.......520....... ..530.........540.........550.........560.........570.........580.........590
 
   693......700.........710.........720.........730.........740.........750.........760.........770..
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV
Query Conservation      



 
 

   
       



                   
            




       
   
   
Alig confidence 


































.











































Template Conservation   



  
     
  
  
    



       .        
  

  
    
 


 


       
   
   
Template Sequence  QAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDL. NQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATY
Template Known Secondary structure  T
SSS


S
GGGGSST.TSTT




ST
S
Template Predicted Secondary structure 














.












Template SS confidence 















































































   591........600.........610.........620..... ....630.........640.........650.........660.........
 
   773......780.......
Predicted Secondary structure 








Query SS confidence 














Query Sequence  IQGYFFSRPLPAEEI
Query Conservation   

     
      
Alig confidence 














Template Conservation   

     
      
Template Sequence  IQGYYLQGPSQAMDY
Template Known Secondary structure 

TTT


BSS


Template Predicted Secondary structure 






Template SS confidence 














   670.........680....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions