Job Description P76129 Confidence 100.00% Date Thu Jan 5 12:19:21 GMT 2012 Rank 12 Aligned Residues 161 % Identity 19% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		L	A	L	E	Q	E	K	S	R	Q	H	I	E	Q	L	I	Q	F	D	P	M	T	G	L	P	N	R	N	N	L	H	N	Y	L	D	D	L	V	D	K	.	.	.	.	A	V	S	P	V	V	Y	L	I	G	V	D	H	I	Q	D	V	I	D	S	L	G	Y	A	W	A	D	Q	A	L	L	E	V	V	N	R
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.																					.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I	D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.	G	D	R	I	L	Q	L	V	A	E	T
Template Known Secondary structure																			B		T	T	T		S	B																				T																				.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.						.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		F	R	E	K	L	K	P	D	Q	Y	L	C	R	I	E	G	T	Q	F	V	L	V	S	L	E	N	D	V	S	N	I	T	Q	I	A	D	E	L	R	N	V	V	S	K	P	I	M	I	D	D	K	P	F	P	L	T	L	S	I	G	I	S	.	.	.	.	.	Y	D	L	G	K	N	R	D	Y	L	L	S	T
Query Conservation																																																																.	.	.	.	.
Alig confidence																																																.	.	.														.	.	.	.	.
Template Conservation																																																.	.	.
Template Sequence		I	T	S	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	S	.	.	.	A	R	X	V	P	V	T	A	S	I	G	V	A	Q	G	I	L	G	T	D	V	D	G	G	I	E	E	L	V	R	L
Template Known Secondary structure					T			T	T							S	S	S							S	S																					T	.	.	.	T	T	T																S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	N	A	M	D	Y	I	R	K	N	G	G	N	G	W	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure												S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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