 |
Job Description | P76129 | Confidence | 37.99% | Date | Thu Jan 5 12:19:21 GMT 2012 |
Rank | 385 | Aligned Residues | 106 |
% Identity | 15% | Template | c3eywA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux |
PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
|
Resolution | 2.40 Å |
|
 |
  |   |
645 | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | P | N | Q | V | S | D | A | M | H | A | W | G | I | D | G | H | Q | L | T | V | E | I | T | E | S | M | M | M | E | H | D | T | E | I | F | K | R | I | Q | I | L | R | D | M | G | V | G | L | S | V | D | D | F | G | T | G | F | S | G | L | S | R | L | V | S | L | P | V | T | E | I | K | I | D | K | S | F | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |
| . | . |
|
|
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|
| . | . | . | . |
|   |   |   |
|
|   |   |
|
|
|   |   | . | . | . |
|   |   |
|
|
Template Sequence |   |
R | F | G | Q | I | T | G | R | L | L | L | S | S | G | V | K | M | . |
. |
V | V | L | D | H | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | H | I | E | T | L | R | K | F | G | M | K | V | F | Y | G | D | A | . |
. |
. |
. |
T | R | M | D | L | L | E | S | A | G | A | A | K | . |
. |
. |
A | E | V | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  | . | . |  |  |  |  | S |
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  | S |
| T | . | . | . | . | T |
|  |  |  |  |  |  |  | T | T | T | T | . | . | . |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | |
|
. | . | . | . | 430 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | |
|
|
|
. | . | . | . | . | . | . | . | . | 460 | . | . | . | |
|
|
. | . | . | . | . |
  |
  |   |
725 | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | C | L | T | E | K | R | I | L | A | L | L | E | A | I | T | S | I | G | Q | S | L | N | L | T | V | V | A | E | G | V | E | T | K | E | Q | F | E | M | L | R | K | I | H | C | R | V | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
| . | . | . |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
Template Sequence |   |
N | A | I | D | D | P | Q | T | N | L | Q | L | T | E | M | V | K | E | H | F | P | H | L | Q | I | I | A | R | A | . |
. |
. |
R | D | V | D | H | Y | I | R | L | R | Q | A | G | V | E | K | P |
Template Known Secondary structure |   |
 |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  | . | . | . | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
469 | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | |
|
|
. | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|