Job Description P76129 Confidence 99.88% Date Thu Jan 5 12:19:21 GMT 2012 Rank 25 Aligned Residues 218 % Identity 19% Template c3ewkA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:sensor protein; PDBTitle: structure of the redox sensor domain of methylococcus capsulatus2 (bath) mmos Resolution 2.34 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	I	N	E	N	D	E	V	M	F	F	N	P	A	A	E	K	L	W	G	Y	K	R	E	E	V	I	G	N	N	I	D	M	L	I	P	R	D	L	R	P	A	H	P	E	Y	I	R	H	N	R	E	G	G	K	A	R	V	E	G	M	S	R	E	L	Q	L	E	K	K	D	G	S	K	I	W	T	R
Query Conservation
Alig confidence																																																												.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		V	S	I	T	D	L	Q	G	R	I	L	Y	A	N	D	N	F	C	A	V	S	R	Y	G	R	E	E	L	V	G	Q	D	H	R	I	V	N	S	G	Y	H	G	K	A	Y	I	R	D	M	W	R	T	I	S	R	G	N	I	.	.	.	.	W	Q	G	E	F	C	N	R	R	K	D	G	T	R	Y	W	V	D
Template Known Secondary structure							T	T		B												T	T							T	T	S	B	G	G	G	G			S		S													T	T	T			.	.	.	.										S	S	S
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		F	A	L	S	K	V	S	A	E	G	K	.	.	V	Y	Y	L	A	L	V	R	D	A	S	V	E	M	A	Q	K	E	Q	T	R	Q	L	I	I	A	V	D	H	L	D	R	P	V	I	V	L	D	P	E	R	H	I	V	Q	C	N	R	A	F	T	E	M	F	G	Y	C	I	S	E	A	S	G	M	Q	P	D
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		S	T	I	V	P	L	M	D	N	A	G	K	P	R	Q	Y	I	S	I	R	R	D	I	T	A	Q	K	E	A	E	A	Q	L	A	R	L	K	Q	A	M	D	A	N	S	E	M	I	L	L	T	D	R	A	G	R	I	I	Y	A	N	P	A	L	C	R	F	S	G	M	A	E	G	E	L	L	G	Q	S	P	S
Template Known Secondary structure										S	S	S													T	T	T	T															T			S							T	T	S														T			T					S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		T	L	L	N	I	P	E	F	P	A	D	N	R	I	R	L	Q	Q	L	L	W	K	T	A	R	D	Q	D	E	F	L	L	L	T	R	.	.	.	.	.	.	T	G	E	K	I	W	I	K	A	S	I	S	P	V	Y	D	V	L	A	H	L	Q	N	L	V	M	T	F	S	D
Query Conservation																																					.	.	.	.	.	.
Alig confidence						.																															.	.	.	.	.	.
Template Conservation						.
Template Sequence		I	L	D	S	.	P	L	A	D	Q	E	T	L	A	A	M	Q	E	A	L	Q	A	G	Q	P	W	S	G	R	L	L	N	R	R	R	T	G	P	A	P	H	D	A	E	D	Y	W	A	E	I	S	T	T	P	I	H	T	D	G	N	G	L	V	G	Y	V	Q	I	Q	H	D
Template Known Secondary structure		G	G	B		.	T	T	S															T															S	S	S	S																	S	S	S
Template Predicted Secondary structure						.
Template SS confidence
		256	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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