Return to main results Retrieve Phyre Job Id

Job DescriptionP76129
Confidence89.87%DateThu Jan 5 12:19:21 GMT 2012
Rank127Aligned Residues109
% Identity13%Templatec3cu5B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   675....680.........690.... .....700.........710.........720.........730.........740.........750...
Predicted Secondary structure 




.


















Query SS confidence 



















.


























































Query Sequence  EHDTEIFKRIQILRDMGVGL. SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA
Query Conservation              
   
   .  



 
 

   
       



                   
            
Alig confidence 



















.




























.....



















.



Template Conservation 
       
   
         
  
     

        





  
.....
   
      
        .

  
Template Sequence  DEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRM. . . . . PRMDGIELVDNILKLYPDCS. VIFM
Template Known Secondary structure  S
TS
TTTS
SSS

SS

.....TTS

TT
.
Template Predicted Secondary structure 














.....









.
Template SS confidence 















































































   10.........20.........30.........40.........50......... 60.........70......... 80...
 
   754.....760.........770.........780.........790...
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS
Query Conservation 



       
   
    

     
         
  
Alig confidence 


















....
















Template Conservation 
          
   
   ....

 

     
   
  
Template Sequence  SGYSDKEYLKAAIKFRAIR. . . . YVEKPIDPSEIMDALKQ
Template Known Secondary structure 
TT


SS

....SS

TT
Template Predicted Secondary structure 






....



Template SS confidence 







































   84.....90.........100.. .......110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions