Job Description P76129 Confidence 89.69% Date Thu Jan 5 12:19:21 GMT 2012
Rank 129 Aligned Residues 107
% Identity 12% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
675 . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700 . . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E H D T E I F K R I Q I L R D M G V G L S V D D F G T G F S G L S R L V S L P V T E I K I D K S F V D R C L T E K R I L A L L E A I T S I G Q S L N L T V V A E
Query Conservation  
                                                                                                                             
Alig confidence  
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Template Conservation  
                              .                                                       . . . . . . .                              
Template Sequence  
D G R L A A A T L R I Q L E S L G Y D V .
L G V F D N G E E A V R C A P D L R P D I A L V D I M L C G A L D G .
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V E T A A R L A A G C N L P I I F I
Template Known Secondary structure  
T . S S S S S S S S . . . . . . . S
Template Predicted Secondary structure  
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Template SS confidence  
   
15 . . . . 20 . . . . . . . . . 30 . . . .
. . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . .
. 70 . . . . . . . . . 80 . . . . . .
 
   
755 . . . . 760 . . . . . . . . . 770 . . . . . . . . . 780 . . . . . . . . . 790 . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
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G V E T K E Q F E M L R K I H C R V I Q G Y F F S R P L P A E E I P G W M S S
Query Conservation  
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Alig confidence  
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Template Conservation  
                                . . . .                          
Template Sequence  
T S S Q D V E T F Q R A K R V N P F .
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G Y L A K P V A A D T L H R S I E M
Template Known Secondary structure  
T T S . . . . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
87 . . 90 . . . . . . . . . 100 . . . .
. . . . . 110 . . . . . . . . . 120 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]